Cryo-EM structure of apo-state of human CNGA3/CNGB3 channel
Resolution: 2.93 Å
EM Method: Single-particle
Fitted PDBs: 7rhs
Q-score: 0.538
Nat Struct Mol Biol (2022) 29 pp. 40-46 [ Pubmed: 34969976 DOI: doi:10.1038/s41594-021-00699-y ]
- Cyclic nucleotide-gated cation channel beta-3 (95 kDa, Protein from Homo sapiens)
- Sodium ion (22 Da, Ligand)
- Cyclic nucleotide-gated cation channel alpha-3 (80 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Native human cone photoreceptor heterotetrameric cng channel cnga3/cngb3 (Complex from Homo sapiens)
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 7nzm
Q-score: 0.26
Nat Struct Mol Biol (2021) 28 pp. 835-846 [ Pubmed: 34625748 DOI: doi:10.1038/s41594-021-00666-7 ]
- Deoxyribonuclease-1 (29 kDa, Protein from Bovine)
- Eukaryotic translation initiation factor 2 subunit 1 (21 kDa, Protein from Homo sapiens)
- Protein phosphatase 1 regulatory subunit 15a,maltose/maltodextrin-binding periplasmic protein (49 kDa, Protein from Escherichia coli (strain K12))
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Serine/threonine-protein phosphatase pp1-alpha catalytic subunit (33 kDa, Protein from Oryctolagus cuniculus)
- Manganese (ii) ion (54 Da, Ligand)
- Actin, alpha skeletal muscle, intermediate form (41 kDa, Protein from Rabbit)
- Pre-dephosphorylation complex of phosphorylated eif2alpha_2-187 with trapped holophosphatase (pp1a_d64a/ppp1r15a_553-624/g-actin) (181 kDa, Complex)
Cryo-EM structure of STRIPAK complex
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7k36
Q-score: 0.43
Jeong BC, Bae SJ, Ni L, Zhang X, Bai XC, Luo X
Nat Struct Mol Biol (2021) 28 pp. 290-299 [ Pubmed: 33633399 DOI: doi:10.1038/s41594-021-00564-y ]
- Inositol hexakisphosphate (660 Da, Ligand)
- Mob-like protein phocein (26 kDa, Protein from Homo sapiens)
- Serine/threonine-protein phosphatase 2a catalytic subunit alpha isoform (35 kDa, Protein from Homo sapiens)
- Striatin-3 (77 kDa, Protein from Homo sapiens)
- Manganese (ii) ion (54 Da, Ligand)
- Sk7 complex (817 kDa, Complex from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Serine/threonine-protein phosphatase 2a 65 kda regulatory subunit a alpha isoform (65 kDa, Protein from Homo sapiens)
- Striatin-interacting protein 1 (95 kDa, Protein from Homo sapiens)
Structure of Dip1-activated Arp2/3 complex with nucleated actin filament
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6w17
Q-score: 0.409
Shaaban M, Chowdhury S, Nolen BJ
Nat Struct Mol Biol (2020) 27 pp. 1009-1016 [ Pubmed: 32839613 DOI: doi:10.1038/s41594-020-0481-x ]
- Complex consisting of actin-filament nucleator, arp2/3 complex associated with nucleation promoting factor dip1 and first four actin subunits from the pointed end of the nucleated actin-filament (446 kDa, Complex from Schizosaccharomyces pombe (strain 972 / ATCC 24843))
- Phalloidin (808 Da, Protein from death cap)
- Actin-related protein 2 (44 kDa, Protein from Fission yeast)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Actin, alpha skeletal muscle (42 kDa, Protein from Rabbit)
- Actin-related protein 2/3 complex subunit 1 (41 kDa, Protein from Fission yeast)
- Actin-related protein 2/3 complex subunit 5 (16 kDa, Protein from Fission yeast)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Actin-related protein 2/3 complex subunit 3 (19 kDa, Protein from Fission yeast)
- Actin-related protein 2/3 complex subunit 2 (37 kDa, Protein from Fission yeast)
- Actin-related protein 3 (47 kDa, Protein from Fission yeast)
- Protein dip1 (43 kDa, Protein from Schizosaccharomyces pombe (strain 972 / ATCC 24843))
- Actin-related protein 2/3 complex subunit 4 (19 kDa, Protein from Fission yeast)
- Magnesium ion (24 Da, Ligand)
Cryo-EM structure of F-actin in complex with ADP
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 5onv
Q-score: 0.372
Merino F, Pospich S, Funk J, Wagner T, Kullmer F, Arndt HD, Bieling P, Raunser S
Nat Struct Mol Biol (2018) 25 pp. 528-537 [ Pubmed: 29867215 DOI: doi:10.1038/s41594-018-0074-0 ]
- Actin, alpha skeletal muscle (41 kDa, Protein from Rabbit)
- Filamentous alpha actin in complex with adp (Complex from Oryctolagus cuniculus)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
Cryo-EM structure of jasplakinolide-stabilized F-actin in complex with ADP
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 5ooc
Q-score: 0.449
Merino F, Pospich S, Funk J, Wagner T, Kullmer F, Arndt HD, Bieling P, Raunser S
Nat Struct Mol Biol (2018) 25 pp. 528-537 [ Pubmed: 29867215 DOI: doi:10.1038/s41594-018-0074-0 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Filamentous jasplakinolide-stabilized alpha actin in complex with adp (Complex from Oryctolagus cuniculus)
- (4~{r},7~{r},10~{s},13~{s},15~{e},19~{s})-10-(4-azanylbutyl)-4-(4-hydroxyphenyl)-7-(1~{h}-indol-3-ylmethyl)-8,13,15,19-tetramethyl-1-oxa-5,8,11-triazacyclononadec-15-ene-2,6,9,12-tetrone (673 Da, Ligand)
- Actin, alpha skeletal muscle (41 kDa, Protein from Rabbit)
- Magnesium ion (24 Da, Ligand)
Cryo-EM structure of jasplakinolide-stabilized F-actin in complex with ADP-Pi
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 5ood
Q-score: 0.424
Merino F, Pospich S, Funk J, Wagner T, Kullmer F, Arndt HD, Bieling P, Raunser S
Nat Struct Mol Biol (2018) 25 pp. 528-537 [ Pubmed: 29867215 DOI: doi:10.1038/s41594-018-0074-0 ]
- Filamentous jasplakinolide-stabilized alpha actin in complex with adp-pi (Complex from Oryctolagus cuniculus)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- (4~{r},7~{r},10~{s},13~{s},15~{e},19~{s})-10-(4-azanylbutyl)-4-(4-hydroxyphenyl)-7-(1~{h}-indol-3-ylmethyl)-8,13,15,19-tetramethyl-1-oxa-5,8,11-triazacyclononadec-15-ene-2,6,9,12-tetrone (673 Da, Ligand)
- Actin, alpha skeletal muscle (41 kDa, Protein from Rabbit)
- Phosphate ion (94 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
Cryo-EM structure of F-actin in complex with AppNHp (AMPPNP)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 5ooe
Q-score: 0.457
Merino F, Pospich S, Funk J, Wagner T, Kullmer F, Arndt HD, Bieling P, Raunser S
Nat Struct Mol Biol (2018) 25 pp. 528-537 [ Pubmed: 29867215 DOI: doi:10.1038/s41594-018-0074-0 ]
- Actin, alpha skeletal muscle (41 kDa, Protein from Rabbit)
- Filamentous alpha actin in complex with appnhp (amppnp) (Complex from Oryctolagus cuniculus)
- Magnesium ion (24 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
Cryo-EM structure of F-actin in complex with ADP-BeFx
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 5oof
Q-score: 0.478
Merino F, Pospich S, Funk J, Wagner T, Kullmer F, Arndt HD, Bieling P, Raunser S
Nat Struct Mol Biol (2018) 25 pp. 528-537 [ Pubmed: 29867215 DOI: doi:10.1038/s41594-018-0074-0 ]
- Actin, alpha skeletal muscle (41 kDa, Protein from Rabbit)
- Filamentous alpha actin in complex with adp-befx (Complex from Oryctolagus cuniculus)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
Cryo-EM structure of F-actin in complex with ADP-Pi
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6fhl
Q-score: 0.497
Merino F, Pospich S, Funk J, Wagner T, Kullmer F, Arndt HD, Bieling P, Raunser S
Nat Struct Mol Biol (2018) 25 pp. 528-537 [ Pubmed: 29867215 DOI: doi:10.1038/s41594-018-0074-0 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Filamentous alpha actin in complex with adp-adppi (Complex from Oryctolagus cuniculus)
- Actin, alpha skeletal muscle (41 kDa, Protein from Rabbit)
- Phosphate ion (94 Da, Ligand)
- Magnesium ion (24 Da, Ligand)